Research Center Published Papers

Original papers: from 2006

Analysis of microflora at early stage of high-temperature composting process

S. Yabe, N. Yoshida, H. Shindo, K. Kakuta, M. Hazaka and T. Koizumi: Soil Microorganisms 60: 109-115, 2006

Construction of compost-metagenome library and screening of functional gene encoding cellulase

S. Yabe, Y. Sekiyama, H. Shindo and T. Koizumi: Journal of Environmental Biotechnology 7: 33-38, 2007

Thermaerobacter composti sp. nov., a novel extremely thermophilic bacterium isolated from compost.,

S. Yabe, A. Kato, M. Hazaka, and A. Yokota: J. Gen. Appl. Microbiol., 55: 323-328, 2009

Thermosporothrix hazakensis gen. nov., sp. nov., isolated from compost and description of Thermosporotrichaceae fam. nov. within the class Ktedono-bacteria.

S. Yabe, Y. Aiba, Y. Sakai, M. Hazaka, and A. Yokota: Int. J. Syst. Evol. Microbiol., 60: 1794-1801, 2010

A lifecycle of branched aerial mycelium- and multiple budding spores-forming bacterium Thermosporothrix hazakensis belonging to the phylum Chloroflexi.

S. Yabe, Y. Aiba, Y. Sakai, M. Hazaka, and A. Yokota: J. Gen. Appl. Microbiol., 56: 137-141, 2010

Thermasporomyces composti gen. nov., sp. nov., a novel thermophilic actinomycete isolated from compost.

S. Yabe, Y. Aiba, Y. Sakai, M. Hazaka, and A.Yokota: Int. J. Syst. Evol. Microbiol., 61: 86-90, 2011

Thermogemmatispora onikobensis gen. nov., sp. nov. and Thermogemmatispora foliora sp. nov., isolated from geothermal fallen leaves and description of Thermogemmatisporaceae fam. nov. and Thermogemmatisporales ord. nov. within the class Ktedonobacteria.

S. Yabe, Y. Aiba, Y. Sakai, M. Hazaka, and A. Yokota: Int. J. Syst. Evol. Microbiol., 61: 903-910, 2011

Isolation of thermophilic bacteria from compost on antibiotic-supplemented medium (NOTE)

S. Yabe, Y. Aiba, Y. Sakai, M. Hazaka and A. Yokota: Microbiology and Culture Collections 27: 2011

Clutivation of Uncultured Bacteria of the Class Ktedonobacteria in the Phylum Chloroflexi.

Akira Yokota, Makara SERI SAINS., 16:1-8, 2012

Thermovum composti gen. nov., sp. nov., a novel thermophilic alphaproteo- bacterium isolated from compost.

S. Yabe, Y. Aiba, Y. Sakai, M. Hazaka, and A. Yokota: Int. J. Syst. Evol. Microbiol., 61: 2012 doi:10.1099/ijs.0.037812-0

Sphingobacterium thermophilum sp. nov., a novel thermophilic bacteroidetes isolated from compost.

S. Yabe, Y. Aiba, Y. Sakai, M. Hazaka, K. Kawahara and A. Yokota: Int. J. Syst. Evol. Microbiol., 63:1584-1588, 2013.1099/ijs.0.042481-0

Identification and Biosynthesis of New Acyloins from the Thermophilic Bacterium Thermosporothrix hazakensis SK20-1T.

Park, J. S., Kataya, N., Izumikawa, M., Yabe, S., Shinya, K., Nishiyama, M. and Kuzuyama T: ChemBioChem,15: 527-532, 2014

Reviews

Paper Awarded “Isolation, systematic classification and genome analysis of novel thermophilic bacteria (Features of Ktedonobacteria belonging to the Chloroflexi class)”

S. Yabe: Japan Society for Culture Collections 28: 2012 [in press]

Doctoral Thesis

Isolation, systematic classification and genome analysis of novel thermophilic bacteria

S. Yabe: 2010 (Doctor of Agriculture, University of Tokyo)

Analysis of microflora in composting process and isolation of new cellulase gene by metagenomic library method

S. Yabe: 2007 (Doctor of Zymology, Tokyo University of Agriculture)

Academic Related Award

July 2012 Japan Society for Culture Collections Incentive Award, Japan Society for Culture Collections

S. Yabe

International Conference Proceedings

1 International Society for Microbial Ecology, Aug. 20-24, 2010, Seatle, USA Characterization of actinomycetes-like bacteria belonging to the class Ktedonobacteria in the phylum Chloroflexi.

S. Yabe, Y. Aiba, Y. Sakai, M. Hazaka and A. Yokota

Patents, others

Patent application: 2011-123754 “Novel cellulase derived from Thermosporothrix hazakensis”

(Patent pending in Japan and U.S.)